PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 19364 Da PI: 10.5416 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 7.8e-21 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g RWW05254.1 37 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARSLRG 86 69*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MMAVETIPTR NAGWGTVAVT GSKDAAVRMD GGRKEAHFRG VRKRPWGRFA AEIRDPWKKT 60 RKWLGTFDTA EEAARAYDEA ARSLRGPEAK TNFGNSAPVI GVLPSAAASA VPPWRSGFLA 120 VAPAPYGLDR FVGWQSSQSK YSGYRFEAVK MVVSEQEEAT TTKKSFAFDL NLPPPLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 8e-24 | ERF family protein |