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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 19885.3 Da PI: 10.3515 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 60 | 109 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp ng +r +lg+f tae Aa a+++a+ +++g RWW04557.1 60 YRGVRQRP-WGKYAAEIRDPGRNG--ARLWLGTFETAEAAALAYDRAAFRIRG 109 9*******.**********95554..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEMNADLAFL EIIRRYLLEE EFAATTTTSG ADGSGGNELP NAVTEVAPPQ RAAPERGRNY 60 RGVRQRPWGK YAAEIRDPGR NGARLWLGTF ETAEAAALAY DRAAFRIRGS RALLNFPLLV 120 SSQDAAAKRA STETPLVGDN KRRKRVAASV SSAGPSLTVQ KNRSGLDTSG GLSILGSELA 180 TTVGHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-27 | ERF family protein |