PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HB-other | ||||||||
Protein Properties | Length: 130aa MW: 14538.3 Da PI: 8.5092 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.1 | 8.3e-10 | 47 | 88 | 3 | 44 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44 k+++++++q+++Le+ Fe ++++ e++ +LA++lgL+ rqV RWW04509.1 47 KKRRLSADQVRALEKNFEVDNKLEPERKVRLAQELGLQPRQV 88 45689************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MKRPLGYSDH LIPTGEERSM FQPFMDGVED DEFIDEEMCS GGPRGAKKRR LSADQVRALE 60 KNFEVDNKLE PERKVRLAQE LGLQPRQVXA GGRLVPEPPG PVEDQAAGAR LRGPQGQLRP 120 APTRLRRPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 2e-20 | HD-ZIP family protein |