PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04377.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 414aa MW: 45415.8 Da PI: 9.3456

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38	3.8e-12	17	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I + ++t+ q++s+ qk+ RWW04377.1 17 RERWTEEEHNRFLEALKLYGRA-WQRIEGFIMlvtehiGTKTAVQIRSHAQKF 68 78****************88.9999876666667776**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
VVGSDETRKP YTITKRRERW TEEEHNRFLE ALKLYGRAWQ RIEGFIMLVT EHIGTKTAVQ 60 IRSHAQKFFT KVSFLFCRNP ASVAAASLWP SAEAETSLQS TAEFLAGEIP GRHMNPTPSL 120 EEIAAVTVAA AAAWWAAQGL LPWFPPLVGF AFAPPNTTTI PSTDTAQLQG HVGTFGSPLK 180 ENQKVGNQNQ VEDLKPCHHS SKSLSSSSDS YDSGRGENSS ELKAARSDKF TPSVFGGFHS 240 SDNGRNKKKK DRSSCGSNTP SSSEVEMKTI EKHEKVDGGA KESYSSSSAA CKINNRSFCQ 300 GRFAFQELFK RGVLPQSFSP PQAEEAAAIN KGDAGKVAVD LNKNASSTTE PNHLNGDTKE 360 EMCRQSNGSI GDRKLKVRQM GFKPYKRWSV EAKENKETAE ADKKRIHLLG EASI

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

VVGSDETRKP YTITKRRERW TEEEHNRFLE ALKLYGRAWQ RIEGFIMLVT EHIGTKTAVQ  60
IRSHAQKFFT KVSFLFCRNP ASVAAASLWP SAEAETSLQS TAEFLAGEIP GRHMNPTPSL  120
EEIAAVTVAA AAAWWAAQGL LPWFPPLVGF AFAPPNTTTI PSTDTAQLQG HVGTFGSPLK  180
ENQKVGNQNQ VEDLKPCHHS SKSLSSSSDS YDSGRGENSS ELKAARSDKF TPSVFGGFHS  240
SDNGRNKKKK DRSSCGSNTP SSSEVEMKTI EKHEKVDGGA KESYSSSSAA CKINNRSFCQ  300
GRFAFQELFK RGVLPQSFSP PQAEEAAAIN KGDAGKVAVD LNKNASSTTE PNHLNGDTKE  360
EMCRQSNGSI GDRKLKVRQM GFKPYKRWSV EAKENKETAE ADKKRIHLLG EASI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	251	RNKKKKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37260.1	4e-29	MYB_related family protein