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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 21367.3 Da PI: 11.5176 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.9 | 5.8e-14 | 124 | 171 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 kGVr+++ +g+W+AeIrdp +r r +lg++ tae Aa a+ aa ++le RWW03828.1 124 KGVRQRP-SGKWAAEIRDP----IRrVRRWLGTYPTAEAAAGAYRAASRQLEE 171 8******.7*********7....246999******************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MQRKSTTKKP KQMGASGSSP KKKLEKSAPS ERDLSERLND SLGLEKKTVR KARVFFADPD 60 ATESSSDEDE EGGSGTKKRK KKKKKKKRKR VRYEIPLTRA DKTLETRKRS GPSRASSSAT 120 GRQKGVRQRP SGKWAAEIRD PIRRVRRWLG TYPTAEAAAG AYRAASRQLE EEKRSFVRPT 180 EATPPTSPRP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 81 | KKRKK |
2 | 77 | 83 | KKRKKKK |
3 | 77 | 85 | KKRKKKKKK |
4 | 77 | 90 | KKRKKKKKKKKRKR |
5 | 78 | 84 | KKRKKKK |
6 | 78 | 86 | KKRKKKKKK |
7 | 79 | 85 | KKRKKKK |
8 | 79 | 87 | KKRKKKKKK |
9 | 80 | 86 | KKRKKKK |
10 | 80 | 88 | KKRKKKKKK |
11 | 81 | 87 | KKRKKKK |
12 | 81 | 89 | KKRKKKKKK |
13 | 82 | 88 | KKRKKKK |
14 | 82 | 90 | KKRKKKKKK |
15 | 83 | 89 | KKRKKKK |
16 | 84 | 89 | KKKKRK |
17 | 84 | 90 | KKRKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 5e-14 | ERF family protein |