PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 386aa MW: 40781.1 Da PI: 10.6973 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 181 | 231 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp k+ r++lg+f+taeeAa a++aa+++++g RWW03750.1 181 TRYRGVRKRP-WGRYAAEIRDPA---KKCRVWLGTFDTAEEAAGAYDAAALRFRG 231 68********.**********84...36*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MIDIIGSHAD AVTAVTALPR PVLYPRRLTT SSCGSLPSIQ KRGDRDRAAQ PHSTANARRA 60 PRATAAPRAT WPQIKPGNQT LIDVIFLTLP SSFPRSNSPW TAPHPCPFRR SHRFLRSSPR 120 LYLYFTAHSS LEPTTHLSSS ISRSIVSARE SHTTMAPRAS NQGGEGGHGA VVGGDEDWKG 180 TRYRGVRKRP WGRYAAEIRD PAKKCRVWLG TFDTAEEAAG AYDAAALRFR GPKAKTNFPC 240 PVNSAAAVAA APAGFGTIAA APASPSSSSV ESSTPSRQPA ARHPPLDLDP GQPSARFLFP 300 HVAAAAAAAC PPPLVLFDSI AASKKAAAAA KAAWPATVKV FGSLSGIESD SDSSSVVDCR 360 CSPTATPKGR IRFDLDLNMP PPSEVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 1e-23 | ERF family protein |