PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03459.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 426aa MW: 46024.4 Da PI: 6.8932

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.00019	114	133	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +Cp Cgk+F++ +L H+r RWW03459.1 114 TCPECGKTFPSDKSLFGHLR 133 6*****************98 PP
2	zf-C2H2	12.2	0.00054	280	302	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k+Fs++ L H +H RWW03459.1 280 YQCSVCFKTFSSHQALGGHRASH 302 9***************9999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MAARLVEGGS HYPTWDAAVA AEEQAHEELT KNTLRLRIKC SKTGEYREAA AQEAVSPSDD 60 SGVRADQSTG GADGELPDDE DANAESAAEV KEAVDEGCGS FKRKHANRRS EVPTCPECGK 120 TFPSDKSLFG HLRCHPERDY RGAIPPPGAR KKPQPDAYSS VARVPPATKW STARRGRKGT 180 AGDRDDDAIA ADALLLLADG KPHRPQTTTT TEEEDTDTKQ IAGTHFAGTD AIGWDQKSDD 240 MDAGSYGNEL IPSYKRSKKR KIKELELVNG SGASARCRRY QCSVCFKTFS SHQALGGHRA 300 SHNKKKSNPE EAAGVPDENG GANPKHGEDL IHANGAVIKA EIAEHRCTNC NLTFRSGQAL 360 GGHKRRHFNE LQHQAPSSSP HSNESDKGAN GLLPNRPPSS SAYSSESDKR AKHGLFDFDL 420 NEVPEL

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MAARLVEGGS HYPTWDAAVA AEEQAHEELT KNTLRLRIKC SKTGEYREAA AQEAVSPSDD  60
SGVRADQSTG GADGELPDDE DANAESAAEV KEAVDEGCGS FKRKHANRRS EVPTCPECGK  120
TFPSDKSLFG HLRCHPERDY RGAIPPPGAR KKPQPDAYSS VARVPPATKW STARRGRKGT  180
AGDRDDDAIA ADALLLLADG KPHRPQTTTT TEEEDTDTKQ IAGTHFAGTD AIGWDQKSDD  240
MDAGSYGNEL IPSYKRSKKR KIKELELVNG SGASARCRRY QCSVCFKTFS SHQALGGHRA  300
SHNKKKSNPE EAAGVPDENG GANPKHGEDL IHANGAVIKA EIAEHRCTNC NLTFRSGQAL  360
GGHKRRHFNE LQHQAPSSSP HSNESDKGAN GLLPNRPPSS SAYSSESDKR AKHGLFDFDL  420
NEVPEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	7e-15	C2H2 family protein