PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03454.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

DBB

Protein Properties

Length: 358aa MW: 39679.8 Da PI: 4.5337

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.9	3.2e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ + e++ +C+++ lC +C + H+ H++ RWW03454.1 4 LCDFCTEQRSVVYCRSDAASLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	zf-B_box	23.6	1.1e-07	46	89	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++ ++++ C++ + lC++C + H + H++++ RWW03454.1 46 LLCDRCTTQPAIVRCTEENASLCQNCDWNNHGRsaltseHKRQT 89 57*****************************5589999999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGHLCDFCTE QRSVVYCRSD AASLCLSCDR NVHSANALSR RHSRTLLCDR CTTQPAIVRC 60 TEENASLCQN CDWNNHGRSA LTSEHKRQTI NCYSGCPSAA EFSRIWSFFE FPDMAEPDCE 120 QGLMTINENS ATNRWRPPED SSNINIGSTL DMNDNRTNPG SSPVNAISCA ADLPAGSMKS 180 TPKISCPRTD EIELCKDDFY EGLAVGDVDM TFENYEDFFG VSRNQTGDLF DDAGIDSYFD 240 MKENSTANSI CNGEFAEEVK QMQETCMNVL SADSMMSNPG GHEDSSLVIT GHQVQSTFSF 300 SGMTGESSAR EYQDCGMSGM LVIREPPWYH TGPESSSLPT SSRESALMRY KEKKKARK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGHLCDFCTE QRSVVYCRSD AASLCLSCDR NVHSANALSR RHSRTLLCDR CTTQPAIVRC  60
TEENASLCQN CDWNNHGRSA LTSEHKRQTI NCYSGCPSAA EFSRIWSFFE FPDMAEPDCE  120
QGLMTINENS ATNRWRPPED SSNINIGSTL DMNDNRTNPG SSPVNAISCA ADLPAGSMKS  180
TPKISCPRTD EIELCKDDFY EGLAVGDVDM TFENYEDFFG VSRNQTGDLF DDAGIDSYFD  240
MKENSTANSI CNGEFAEEVK QMQETCMNVL SADSMMSNPG GHEDSSLVIT GHQVQSTFSF  300
SGMTGESSAR EYQDCGMSGM LVIREPPWYH TGPESSSLPT SSRESALMRY KEKKKARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	7e-88	CO-like family protein