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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 18370.7 Da PI: 4.5775 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 8e-17 | 1 | 48 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +GVr + rg+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g RWW03383.1 1 RGVRMRN-RGKWVSEIREPRK---KSRIWLGTFTTPEMAARAHDVAALSIKG 48 8***999.8*********843...6***********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
RGVRMRNRGK WVSEIREPRK KSRIWLGTFT TPEMAARAHD VAALSIKGAT AILNFPELAT 60 SLPRPASLSP RDIQAAAAKA AAMEPVAALP AAPAASPSAD DELGEIVELP RLGGWFLDSD 120 DPGAEFVYHN DSLDSLPCPG SDFYVSASDP MWECSDALIP SSFDARLWDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-46 | ERF family protein |