PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW03201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 208aa MW: 22900.4 Da PI: 8.9022 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.6e-20 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g RWW03201.1 32 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAVAYDEAALRFKG 81 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MSVSYHVFLY TSSYVHLVDV NCNDEGNVRR RHYRGVRQRP WGKWAAEIRD PKKAARVWLG 60 TFDTAEDAAV AYDEAALRFK GTKAKLNFPE RIQGRTDLGF LVNSGVPERH PPPVPPATPY 120 PDLLQYAQLL QSRDEDLQNV ASGLYVGGTF TPGSSQTPMT SALGSSQHLL GISSQSQYTS 180 FSLSSSSSSP ASSWVHGEQK DKDGSRPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 6e-26 | ERF family protein |