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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW02836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25896.7 Da PI: 6.5425 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 4e-18 | 100 | 150 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + +g r++lg+f++ae Aa a+++a+ +++g RWW02836.1 100 SYRGVRRRP-WGKFAAEIRDSTRRG--IRVWLGTFDSAEAAALAYDQAAFSMRG 150 69*******.**********43343..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDFSLSFHSH NQEHSSESST YSPRSSATDG FGIVCPDKSL PFDENDSEEM LLLSMLAEAS 60 GKASSSSSSE VLDSRSSSRL KEEEVESRSK VGHDTRGEKS YRGVRRRPWG KFAAEIRDST 120 RRGIRVWLGT FDSAEAAALA YDQAAFSMRG TTAVLNFPVE RVRESLRGVK YGEEEIGLSP 180 VVALKRRNTL RRKSTSKKAK GGEVRTAESV VELEDLGAEY LEELLSTSGF ARPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-48 | ERF family protein |