PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02519.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 483aa MW: 53733.1 Da PI: 8.2583

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28.5	3.9e-09	108	155	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++ykGV +g W A+I+ r++lg+f +++ Aa+a++ a+ kl+ RWW02519.1 108 TRYKGVMLQQ-NGHWGAQIYAH-----GHRIWLGTFKSEQAAAAAYDSAAIKLH 155 589*8777.8**9994.....4******99*********997 PP
2	B3	91.9	4.7e-29	234	324	1	87
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+ltpsdv+k++rlv+pkk+a+++ ++++ ++++ + d++ rsW+++++y+k+s++yv+tkGW++Fvk+++L+++D+v F++ ++ RWW02519.1 234 FLKELTPSDVGKLNRLVIPKKHATKYfpqvASVTADEVMVEFVDREDRSWTFRYCYWKSSQSYVFTKGWNKFVKEKRLEAKDTVAFYRCEQ 324 89**************************8899999************************************************6544 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MTARVRPRNL LPAFGSLVRR PEGRLGDAQS CSDDEGQCPL DKPEHLRNYT VCCSTGSVFR 60 VPSREEDAVS MISVATTVAP GREGSDSNSI VNWVSFGPCM ATASNTSTRY KGVMLQQNGH 120 WGAQIYAHGH RIWLGTFKSE QAAAAAYDSA AIKLHHGDSH RNLPATPLTA HEHKFQEMFT 180 TDEVLDMIKI GSYESRMEEY IRRHAIAAAA VKAAPRASLP HAGASGNVTF LEMFLKELTP 240 SDVGKLNRLV IPKKHATKYF PQVASVTADE VMVEFVDRED RSWTFRYCYW KSSQSYVFTK 300 GWNKFVKEKR LEAKDTVAFY RCEQRDGLRR TYCLIDIIRR IGDGNRTSGF SWSNNGAEEL 360 GLSCKRKTEE GDEEGNGTSG FSWSKNGTVG LGLGCKRKAE EGDDEGNHSS GYTGRSGSGA 420 MGLGLSFTRK TKEEDEVGEV VSRLAVTQKS SEARQQEEEQ EQEKRKKRLR LFGFSITDTN 480 DRG

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MTARVRPRNL LPAFGSLVRR PEGRLGDAQS CSDDEGQCPL DKPEHLRNYT VCCSTGSVFR  60
VPSREEDAVS MISVATTVAP GREGSDSNSI VNWVSFGPCM ATASNTSTRY KGVMLQQNGH  120
WGAQIYAHGH RIWLGTFKSE QAAAAAYDSA AIKLHHGDSH RNLPATPLTA HEHKFQEMFT  180
TDEVLDMIKI GSYESRMEEY IRRHAIAAAA VKAAPRASLP HAGASGNVTF LEMFLKELTP  240
SDVGKLNRLV IPKKHATKYF PQVASVTADE VMVEFVDRED RSWTFRYCYW KSSQSYVFTK  300
GWNKFVKEKR LEAKDTVAFY RCEQRDGLRR TYCLIDIIRR IGDGNRTSGF SWSNNGAEEL  360
GLSCKRKTEE GDEEGNGTSG FSWSKNGTVG LGLGCKRKAE EGDDEGNHSS GYTGRSGSGA  420
MGLGLSFTRK TKEEDEVGEV VSRLAVTQKS SEARQQEEEQ EQEKRKKRLR LFGFSITDTN  480
DRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	3e-67	RAV family protein