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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 299aa MW: 32907.9 Da PI: 6.4046 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 29 | 78 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p++ r+r +lg+f taeeAa a+++a+++l+g RWW01705.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAALAYDEAARRLYG 78 69****999.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MDNLRKTPVR PWKKGPARGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA 60 TAEEAALAYD EAARRLYGPD AYVNLPHLRA NIGSSIIGKT PHRFKWFPSK SFAPAMPSCG 120 LLNLNAQHNV HVIHQRLQEL RNSKPSSCSS SSSSASSCPS TFRSSEPPAV VPIETRLEGS 180 VIGGPEVVHQ LPVERDPPSA VEKPQIDLKE FLQQLGVLRP ENAPDGGESA GNLAPPEQTP 240 EVSSEMASPA FGLHQSDFNW DTLIEMRALD GNPVMQDDGS QLDDAQEEDF SLPISIWDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57600.1 | 9e-69 | ERF family protein |