PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01673.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 365aa MW: 41100.9 Da PI: 8.2215

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.9	8.2e-23	112	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ + +++ ++l+ +d++ + W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l RWW01673.1 112 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEKQQL 206 99***************************954.4444.49********************************************..5688889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ RWW01673.1 207 LLGIRRA 213 **997 PP
2	Auxin_resp	118.9	4.1e-39	238	321	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPr+s+seFv++++k++ka++ ++vs+GmRf+m+fete+s +rr++Gt++ +sdld vrW+nS+Wr+Lk RWW01673.1 238 AAHAAANNSPFTVFYNPRTSPSEFVIPFAKYQKAIYsNQVSLGMRFRMMFETEESGTRRYMGTITEISDLDAVRWKNSQWRNLK 321 79*******************************989*****************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVVAGERTTI NKELWYACAG PLVAIPPVGS LVVYFPQGHS EQVAASMQKD IDAHIPNYPN 60 LPSKLICLLH NADPDTDEVY AQITLQPVNT DKEALQASDL ALKQTGPQTE FFCKTLTASD 120 TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ ELQARDLHDN IWTFRHIYRG QPKRHLLTTG 180 WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANRQPTNL SSSVLSSDSM HIGILAAAAH 240 AAANNSPFTV FYNPRTSPSE FVIPFAKYQK AIYSNQVSLG MRFRMMFETE ESGTRRYMGT 300 ITEISDLDAV RWKNSQWRNL KVGFHFQLSS CLTAQLVISF TSSFLLGEST DFFFFRFCFF 360 LTMLY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVVAGERTTI NKELWYACAG PLVAIPPVGS LVVYFPQGHS EQVAASMQKD IDAHIPNYPN  60
LPSKLICLLH NADPDTDEVY AQITLQPVNT DKEALQASDL ALKQTGPQTE FFCKTLTASD  120
TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ ELQARDLHDN IWTFRHIYRG QPKRHLLTTG  180
WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANRQPTNL SSSVLSSDSM HIGILAAAAH  240
AAANNSPFTV FYNPRTSPSE FVIPFAKYQK AIYSNQVSLG MRFRMMFETE ESGTRRYMGT  300
ITEISDLDAV RWKNSQWRNL KVGFHFQLSS CLTAQLVISF TSSFLLGEST DFFFFRFCFF  360
LTMLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-170	ARF family protein