PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01584.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Nin-like

Protein Properties

Length: 630aa MW: 70623 Da PI: 7.3133

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	53.8	3.7e-17	317	362	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek +sl++l+kyF++++kdAAk+Lg lT iCR++GI RWP+Rkik++ RWW01584.1 317 EKIVSLQELQKYFAGSLKDAAKSLGA-LT----ICRHHGITRWPSRKIKKV 362 6889******************94.44....8*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MSGDSYQDAL PEIQMVLKAA CESHRLPLAQ TWILCIRQGK KGCRHSDENF KDCVSTVDAA 60 CYVRDPSMSG FQQACSEHHL LRGQGVAGKA FMTNQPCFSS DITDFSKIEY PLSHHAKLFR 120 LRAAVAIRLR CIHTGKVDFV LEFFLPINCI ESAKQKLMLN SLSTTIQEVC QTLRVVTTKE 180 LEHETVLEND DQISSGTFSD KSVSVIGHRS IVNKILPVGT PDVDITEEVL CWEFQGNIPK 240 NILPASVLME PTKQESEGFS ILTHWDPSDM ILPTGDMFSE FKQHYGKSND DNKVSFSAEI 300 NVSNMDSETE KRRTKTEKIV SLQELQKYFA GSLKDAAKSL GALTICRHHG ITRWPSRKIK 360 KVGHSLKKLQ GVIDSVHGPG GAVQFSSLYE SFIKATWSEN NLATGTTFSL SKQNDLPDFL 420 NANQQLERRF SSRTSGSKSL SSSSCSQNSN SSHGCSSEQR KCVDAHEFAF RRDTSVEENQ 480 SSMLEKVQSH IEFHSQPEVA PKSVVRSLNQ KFQIDHHSSG TMSFLPMNRC DFLKVKATCG 540 EEKVILRVQP TWGFRELKQE IRRRFNIGDT ALVSIKYLDD DSEWVLLTCE EDLKECINVH 600 KSTDAHTIRL SVHPVAQLNT KASWSSTALS

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MSGDSYQDAL PEIQMVLKAA CESHRLPLAQ TWILCIRQGK KGCRHSDENF KDCVSTVDAA  60
CYVRDPSMSG FQQACSEHHL LRGQGVAGKA FMTNQPCFSS DITDFSKIEY PLSHHAKLFR  120
LRAAVAIRLR CIHTGKVDFV LEFFLPINCI ESAKQKLMLN SLSTTIQEVC QTLRVVTTKE  180
LEHETVLEND DQISSGTFSD KSVSVIGHRS IVNKILPVGT PDVDITEEVL CWEFQGNIPK  240
NILPASVLME PTKQESEGFS ILTHWDPSDM ILPTGDMFSE FKQHYGKSND DNKVSFSAEI  300
NVSNMDSETE KRRTKTEKIV SLQELQKYFA GSLKDAAKSL GALTICRHHG ITRWPSRKIK  360
KVGHSLKKLQ GVIDSVHGPG GAVQFSSLYE SFIKATWSEN NLATGTTFSL SKQNDLPDFL  420
NANQQLERRF SSRTSGSKSL SSSSCSQNSN SSHGCSSEQR KCVDAHEFAF RRDTSVEENQ  480
SSMLEKVQSH IEFHSQPEVA PKSVVRSLNQ KFQIDHHSSG TMSFLPMNRC DFLKVKATCG  540
EEKVILRVQP TWGFRELKQE IRRRFNIGDT ALVSIKYLDD DSEWVLLTCE EDLKECINVH  600
KSTDAHTIRL SVHPVAQLNT KASWSSTALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-131	Nin-like family protein