PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01362.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 513aa MW: 58340.9 Da PI: 7.3653

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.5e-17	78	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GF vr+++sk + ++ ++kr++vC + g + + k+ ++k+ r+++ +r+ C+a++++kk+ ++w+v ++++ HnHel RWW01362.1 78 EYYSNFARNSGFLVRRERSKGNpEHPLGVYKRELVCHRAGPPLPVKSGeenASKRLRKKKPSRCRCDAQMVIKKNVtagAAHWVVVNFSNVHNHELL 174 69***************999766677********998877664445666679999*********9988889************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MTETETRDTC LTQKHQCPCG DDQCYIDEEA YEDDDLTEQF GPAEPSFLPG IPQTFGTAKV 60 VPPPYVGQSF QNDDEALEYY SNFARNSGFL VRRERSKGNP EHPLGVYKRE LVCHRAGPPL 120 PVKSGEENAS KRLRKKKPSR CRCDAQMVIK KNVTAGAAHW VVVNFSNVHN HELLDRNNLH 180 FSPGYRYISA VDRERILALA KGGCNVNLIL RALEMDKGVK PGELTFTEKD VKNFLQASVS 240 INPENEGSEL LKSCKFMKEK NPDFRYEFTS VEANKLEHIA WSYVVDFQNQ AGEEATTRQN 300 HQNFQMKTCL PLEEHASTIL THYAFEMFQK EIMTSTQYAV FETSRDAYLV RHHLSSDGGH 360 TVSCSPSNEE VSCSCKGFEC NGILCRHVLR VLSLKNCFLV PEKYLLHRWR RESSLFPKSS 420 GYNYRTQALR SLASIIIQES SITKDRFEYV QWHLSRLLNH IRDMPAADEA TLDLELSSSF 480 DATVDVVPAR TVTRGRPRKL KGSTKAAKEM QAM

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MTETETRDTC LTQKHQCPCG DDQCYIDEEA YEDDDLTEQF GPAEPSFLPG IPQTFGTAKV  60
VPPPYVGQSF QNDDEALEYY SNFARNSGFL VRRERSKGNP EHPLGVYKRE LVCHRAGPPL  120
PVKSGEENAS KRLRKKKPSR CRCDAQMVIK KNVTAGAAHW VVVNFSNVHN HELLDRNNLH  180
FSPGYRYISA VDRERILALA KGGCNVNLIL RALEMDKGVK PGELTFTEKD VKNFLQASVS  240
INPENEGSEL LKSCKFMKEK NPDFRYEFTS VEANKLEHIA WSYVVDFQNQ AGEEATTRQN  300
HQNFQMKTCL PLEEHASTIL THYAFEMFQK EIMTSTQYAV FETSRDAYLV RHHLSSDGGH  360
TVSCSPSNEE VSCSCKGFEC NGILCRHVLR VLSLKNCFLV PEKYLLHRWR RESSLFPKSS  420
GYNYRTQALR SLASIIIQES SITKDRFEYV QWHLSRLLNH IRDMPAADEA TLDLELSSSF  480
DATVDVVPAR TVTRGRPRKL KGSTKAAKEM QAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-64	FAR1 family protein