PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 171aa MW: 19355.9 Da PI: 9.921 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.5 | 7e-09 | 8 | 53 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WTt + + +a + + g +W++Iar +g g+t +++ ++ RWW01295.1 8 SSWTTKQNKMFEKALAVFDEGtpdRWHKIARAVG-GKTSDEVRRHYE 53 58*****************99*************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MASGSVTSSW TTKQNKMFEK ALAVFDEGTP DRWHKIARAV GGKTSDEVRR HYELLVEDLR 60 RIEKGYFSYP DCLSSGNTMI TKLSILSRVA VFDEGLHYVL RRRESGEHKN RTSLMSPWSR 120 RRPGMQTKQA VSESYEATMD DDAMAGSSTL SSHVNSALLI ARMHIHFSRS P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 4e-28 | MYB_related family protein |