PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW01163.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 395aa MW: 43369.4 Da PI: 6.236

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW01163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.6	5.1e-26	88	183	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a+++++e++ +++ ++k++W+++sk+m+erg+ +sp+qC++k+++lnkryk+++++ +++ +++++++ ++d+++ RWW01163.1 88 KWTDAMVKLLITAVSYTGEDVASECggrmkhvmlQRKGKWKAISKVMAERGCYVSPQQCEDKFNDLNKRYKRLTDILGRGtSCKVVENPTLLDHMN 183 7*******************998888999999******************************************669*******9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MPGVSYGVLG LQGHMHSHQG SMIHPSMHDA FPTSGQEFNH RPFMDYNKGE RGKTSVSNED 60 EPSLNGDGVD GQNEAGKGKN GSPWHRMKWT DAMVKLLITA VSYTGEDVAS ECGGRMKHVM 120 LQRKGKWKAI SKVMAERGCY VSPQQCEDKF NDLNKRYKRL TDILGRGTSC KVVENPTLLD 180 HMNNLSEKSK DDVRKILSSK HLFYEEMCSY HNCNRLNLPA DPALQRSLQL VLRSRDEHDT 240 KRSSHEDIDQ GDQGADSDDE EGDVLERNAL HGDLVSCFPK RIKFGVDHEE VVLGNASGAD 300 NIAPYYVDQG GSVEREKGRS MGACATKPMA QGDAPPPMEP DPQVEDGGGG QEVEQGPAPA 360 PADNRRRSLG QLFKVRVAAF LPSSSSDLGI SGSVF

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MPGVSYGVLG LQGHMHSHQG SMIHPSMHDA FPTSGQEFNH RPFMDYNKGE RGKTSVSNED  60
EPSLNGDGVD GQNEAGKGKN GSPWHRMKWT DAMVKLLITA VSYTGEDVAS ECGGRMKHVM  120
LQRKGKWKAI SKVMAERGCY VSPQQCEDKF NDLNKRYKRL TDILGRGTSC KVVENPTLLD  180
HMNNLSEKSK DDVRKILSSK HLFYEEMCSY HNCNRLNLPA DPALQRSLQL VLRSRDEHDT  240
KRSSHEDIDQ GDQGADSDDE EGDVLERNAL HGDLVSCFPK RIKFGVDHEE VVLGNASGAD  300
NIAPYYVDQG GSVEREKGRS MGACATKPMA QGDAPPPMEP DPQVEDGGGG QEVEQGPAPA  360
PADNRRRSLG QLFKVRVAAF LPSSSSDLGI SGSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	6e-84	Trihelix family protein