PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW01028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 273aa MW: 29309.1 Da PI: 4.4315 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 43 | 91 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a++ ++g RWW01028.1 43 YLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARTFRG 91 88******.**********843...4***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGFSSSSSSS AIPASDTAQE KRSKRRPQQD NSSNDAGGGG MRYLGVRRRP WGRYAAEIRD 60 PATKERHWLG TFDTAEEAAV AYDRAARTFR GARARTNFAY PDLPLGSSLT PFLSPDLQPP 120 PSSFLLSPPP PLQGSGHPAA MYPALGCQGD YNAISDNAMP CDGADYYYYY QQQQQQDGIQ 180 YATSTLPPSP PPVPAVASPW ESVAAPAAGE EDLSAVWCDA EEFSVQGTTA SHGIFFEEGY 240 VHSPLFGPMP AVDDAAADGF QLGGSSSSSY YYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 3e-19 | ERF family protein |