PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 230aa MW: 25760.9 Da PI: 7.5781 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.3e-14 | 111 | 156 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT +E+ l++++ +++G+g+W+ I+r ++Rt+ q+ s+ qky RWW00415.1 111 QAWTVDEHRLFLRGLEKYGKGDWRNISRNCVLTRTPTQVASHAQKY 156 79*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEAKGEACWN WEKNKAFEIT LAAYTKDHID PWEKIAAAVP GTKLEEIEHH YKLLSNDVNS 60 IESGMLPLPN YTMNSKDLAN DDGQVKGVKQ PGTYSKRGMR LEGYRKRRKG QAWTVDEHRL 120 FLRGLEKYGK GDWRNISRNC VLTRTPTQVA SHAQKYFLRH SSVSRRTRTS ILDISSADSE 180 EDLPVSMEST YPPGTPADPA AAAESDQQAS SSGMGVSVSE SQVCCLQHWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 4e-48 | MYB family protein |