PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW00033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26365.8 Da PI: 9.6779 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.8 | 6.2e-09 | 52 | 82 | 1 | 36 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkf 36 + y+G+r+++ g+Wv+eIr+p+ + +r++lg++ RWW00033.1 52 PSYRGIRYRS--GKWVSEIREPR----KaRRIWLGTY 82 57*****976..*********94....36*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MADRGSDMHR DSHAGGRPLP LRPPPYDQGG GDAAQRSETH TRTEGAASRK HPSYRGIRYR 60 SGKWVSEIRE PRKARRIWLG TYFPDDIASR PAPASPSPSH IRGAAAEAAA ASQQQLGRYV 120 DEEEIFDMPQ LLVNMAEGML ISPPRLSPQG CEDSPEASEG ESLLHVWRSS CFLCLGRGSG 180 DKIGVWRLPR VWPYASSKLC KHSEGRRAIC SQLVCRIEKP RAYRTNAVGT ANALLPTRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-19 | ERF family protein |