PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV99334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25097 Da PI: 9.1046 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 71 | 121 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g RWV99334.1 71 PSYRGVRMRH-WGKWVSEIREPKK---TSRIWLGTFPTAEMAARAHDVAALTIKG 121 57*****999.**********854...5**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MKDPLTVQEC GANTFSSSSS SSSSSSSSII TNASTEVARN SEVISSKAAK RKPHAAGGKG 60 AKKGSSDRKQ PSYRGVRMRH WGKWVSEIRE PKKTSRIWLG TFPTAEMAAR AHDVAALTIK 120 GSSAYLNFPE LASKLPRPAT AAPKDIQAAA ALAAAATFGG HSPGLCGSAE SAPSQNEPSM 180 IPLSPAPTSP RSDDDGALFD LPDLLLDLRE GFGHPSSWNT SSADEFRVEE PFLWGYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32800.1 | 2e-38 | ERF family protein |