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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV98931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 264aa MW: 27548.2 Da PI: 4.9364 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.7 | 4.8e-07 | 15 | 81 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT........................-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................tWktIartmgkgRtlkqcksrw 44 rg W+ e+d+ + +a + ++ W++Ia++++ g+t+ +++ ++ RWV98931.1 15 RGGWSREDDKAFENALATIAPPpkeeeeeeeeeggvseggesgggdWWELIAARVP-GKTAAEVRRHY 81 789*****************99**********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MAGAAAASPS AEDGRGGWSR EDDKAFENAL ATIAPPPKEE EEEEEEEGGV SEGGESGGGD 60 WWELIAARVP GKTAAEVRRH YEALVEDVNA IEAGRVPVPR YVGEEAPSGS TPTAVTHSSK 120 EKQPQHHQDH NSLPGSADRK RGGFDIGGQG KSCSKAEQER RKGIPWTEEE HSIHDITSVN 180 GVDVSSPQGP ITGQANSNPA AVGSTMKHPS QANVPGVAMY GPPVGHPVTG HVVSAVGTPV 240 MLPPGHAPYV MPVAYPVPPP SMHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 5e-27 | MYB family protein |