PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV98691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 367aa MW: 40216.3 Da PI: 6.3395 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3e-15 | 14 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...........kgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g R++k+c++rw +yl RWV98691.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKQAGdacifcqpadwAWRCGKSCRLRWINYL 72 678******************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 367 aa Download sequence |
MGQHTCCHKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKQAGDACIF CQPADWAWRC 60 GKSCRLRWIN YLRPDLKRGA FSDQEEDLII ELHAIATRLP GRTDNEIKNF WNSCIKKKLK 120 QRGIDPNTHN PLAEAEAAEG HASKSSERTC SSCDLKIPVA TLATTTDAVM PVLDEHAVER 180 KPSKTSATPM KCFFPGQFIA SQDISSHPAT IFPLAELGFA TDCSRSQAAG AGLSVCPNPY 240 GRLFEMNQDF SCNALSTGFP STPTAVITTS MGLRTNIINL PPYNPAHVCA GIDGIRYSDA 300 VYSSNSSQSS MSSAGGIEMQ NSSPPFFGNG IFPWSELTTQ DTDTPVQLEG EPEDLKWSEY 360 LEGGFPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G09540.1 | 3e-71 | MYB family protein |