PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV98523.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 271aa    MW: 30439 Da    PI: 8.6047
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV98523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2232.1e-07125147123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C+ Cgk F+r  nL+ H+r H
  RWV98523.1 125 HYCQVCGKGFKRDANLRMHMRAH 147
                 68*******************99 PP
2zf-C2H210.70.0017242257621
                 TTEEESSHHHHHHHHH CS
     zf-C2H2   6 CgksFsrksnLkrHir 21 
                 Cg++F+rk+ Lk H +
  RWV98523.1 242 CGTTFTRKDKLKGHVS 257
                 **************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDAQRRDLLY HLAVLNEKVQ QVQSLVGLIV SPELLRQQPM AAVVSGARSL VQEIIVAASS  60
MMHALQQQEE EENEAVAYEA TGAALDHDLR RLLNGVLEDS VGEEGGSRCE IVEVDAEDLL  120
AKYTHYCQVC GKGFKRDANL RMHMRAHGEE YKTSAALAKG APPPVAGAAR KYSCPQEGCR  180
WNRKHAKFQP LKSMVCVKNH YRRSHCPKMF VCNRCNRRQF AVLSDLRTHE KHCGDHRWMC  240
SCGTTFTRKD KLKGHVSLFL GHTPLPNCTT K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.16e-80C2H2 family protein