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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV97829.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26977.3 Da PI: 9.4597 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.9 | 1.6e-10 | 108 | 150 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 + +GV++ k+ +W A I++ +k+++lg+ + eeAa+++++a+ RWV97829.1 108 KMTGVYF--KNMKWQAAIKVD-----KKQIHLGTVESQEEAARLYDRAAF 150 679**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MVSIRRRRYL GLCSGKSSFP VVVPQPIENG DSVENPNRHL KPVSVYPISS VNTSLVLQVN 60 KSETYSESSN TSGLSMSKET LNHYCPGKEI KRSKRHRRTH YEDQEPRKMT GVYFKNMKWQ 120 AAIKVDKKQI HLGTVESQEE AARLYDRAAF MCGREPNFEL AEEEKQELKQ YNWDDFLAMT 180 RSAINNKKHQ RKLGAGRRKK SETQLPNNNR KQEGGTPVSS VSEDDEDVDD VDASVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 5e-36 | ERF family protein |