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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV97811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GRAS | ||||||||
Protein Properties | Length: 525aa MW: 56544.6 Da PI: 5.0546 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 303.8 | 4.2e-93 | 106 | 489 | 1 | 374 |
GRAS 1 lvelLlecAeavss..gdlelaqalLarlselaspdgd.......pmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevs 88 lv+lL+++Aea++ ++ ela+ +L rl+el+s++g +++Rl+ +ft AL+ l + ++ ++ + ++ + ++ +s++l+a++l++++s RWV97811.1 106 LVHLLVAAAEALAGphKSPELARVILVRLKELVSQAGAgagvggtSIERLTLHFTDALQGLLDGgTSAHCGGRNSFRDGHLHHhTSDVLTAFQLLQDMS 204 689*********98446667**************99866888888******************95566666666666655444699************* PP GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185 P++kf+h+taNqaIle++ g++r+HiiD+di +G+QW++LlqaL sRp ++pp+lRiT+v + g +++++etg+ La fA+++g pf+f+ ++ RWV97811.1 205 PYIKFGHFTANQAILEETRGDRRIHIIDYDIAEGVQWASLLQALVSRPggSQPPHLRITAVTR---GGSRAMRETGRLLAAFAASVGQPFSFSQCRLDA 300 ************************************************77779**********...899*************************99999 PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpreseer 282 e++++ +v +gE+l+ n+vl+ +s+s +s ++L +l +kvv++ve+e +++++ F++rf+ l+ ysa+ dslea++p + ++r RWV97811.1 301 DEQFRPAGVKVVKGETLVMNCVLHPTMNNTRSGSASS-VASFLLGAVELGAKVVTLVEEEeqEQYEEKGFVRRFMGELHRYSAVWDSLEAGFPMQGKAR 398 ***********************88877777888877.8899999999**********9953445999******************************* PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374 +vEr++l+++i +v + ++ +++et + W +++ +GF+ v++s ++ +qaklll ++ dgyrvee+ s+ lvlgWk+r+L+++S+W+ RWV97811.1 399 GMVERVILAPRIAGAVGRAYRD-SKEEETDGGWGKWMAVMGFGRVTISCFNHCQAKLLLGLFN-DGYRVEEDgSNNLVLGWKSRRLLAASVWK 489 *********************9.6677889*********************************.******997999****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 525 aa Download sequence |
MEEAVAPSGC SSTTTTMDDD FICAWNDWNP AVDWGSFSSV ADDFHELIES MMCPDAVDSP 60 DGLMSVSQTP SYNSSPSSMA TSADTPAEED ARAGGGHDGD DKGLRLVHLL VAAAEALAGP 120 HKSPELARVI LVRLKELVSQ AGAGAGVGGT SIERLTLHFT DALQGLLDGG TSAHCGGRNS 180 FRDGHLHHHT SDVLTAFQLL QDMSPYIKFG HFTANQAILE ETRGDRRIHI IDYDIAEGVQ 240 WASLLQALVS RPGGSQPPHL RITAVTRGGS RAMRETGRLL AAFAASVGQP FSFSQCRLDA 300 DEQFRPAGVK VVKGETLVMN CVLHPTMNNT RSGSASSVAS FLLGAVELGA KVVTLVEEEE 360 QEQYEEKGFV RRFMGELHRY SAVWDSLEAG FPMQGKARGM VERVILAPRI AGAVGRAYRD 420 SKEEETDGGW GKWMAVMGFG RVTISCFNHC QAKLLLGLFN DGYRVEEDGS NNLVLGWKSR 480 RLLAASVWKP PLSPPPPCPP SPIRVGIVTP DGLTNSFEDS DFVSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 1e-109 | GRAS family protein |