PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV97076.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 113aa MW: 12680.3 Da PI: 4.3445

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV97076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	45.2	2.6e-14	5	59	47	101
DUF260 47 kalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +++p e+r++a++++++eA +r++dPvyG+vgvi+ lq++++ ++ ela++++++ RWV97076.1 5 QQIPVEQRRQAADAIAMEAYWRVQDPVYGSVGVISMLQREISVAQCELAETQAQI 59 78899*********************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
MCIPQQIPVE QRRQAADAIA MEAYWRVQDP VYGSVGVISM LQREISVAQC ELAETQAQIT 60 MYASQAQSQP NQIAAAQCLV EDVHLVPSQP SQPPFPGLYQ RDDIPQETLQ RHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	3e-13	LBD family protein