PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96875.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 305aa MW: 33240.8 Da PI: 8.2058

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.4e-09	137	180	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + Ka++L A++Y+k+L+ RWV96875.1 137 DHIMAERKRREKLSQRFIALSAIVPGL--------KKASVLGDAIKYLKQLE 180 599*********************8........6************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MDGSFFGQWE VMDELTAQEV AAALGQDLQQ SVSSESYNSV PSDQPLASTG SLRGALKTRS 60 WSSCATEQQN SALVPTASSP SILSFGNQES PSNQNNIYGC LGGMVKRKKE MDVLLHRGSK 120 RNYDTMVGQG TTYHNKDHIM AERKRREKLS QRFIALSAIV PGLKKASVLG DAIKYLKQLE 180 EKVKALTEQV AKRTVESAVL VRKSQLCADG DSSSNFDGRQ CSDSLPEIEA KISEKAILVK 240 IHCENRKGVM VKALSEIEQL HLSVVSASVM PFATSSLDMT VIAQIEEGFD MKAKDVVKKL 300 SSAFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	147	ERKRRE
2	143	148	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-54	bHLH family protein