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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV96487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23098.3 Da PI: 10.3523 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 6e-20 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp k+ r++lg+f+taeeAa+a++ a+++++g RWV96487.1 21 RYRGVRQRP-WGRYAAEIRDPA---KKCRVWLGTFDTAEEAARAYDTAARRFRG 70 69*******.**********84...36*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAPRVKAANG CGGGGEWKGA RYRGVRQRPW GRYAAEIRDP AKKCRVWLGT FDTAEEAARA 60 YDTAARRFRG PKAKTNFPCP LDPLGSAPAA PAVVTIAAVH GAGAAASSSP SVSTVESSTP 120 SRKRAALDLE FRHPPARFPF AHYLPAAARP LVFFDPLAAS KKAAAARPVG LPGLRDLRAP 180 VCGGVESDSD SSSVVDCPGT PTGRIRFELD LNLPPPSEVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 5e-23 | ERF family protein |