PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96481.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 616aa MW: 70359.3 Da PI: 9.5209

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.9	3.4e-28	60	148	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA ++GF+ r+s+ +skr+++i++r++vCs+eg+r++++++ + +++r+r+ tr+gC+a+++vkk+++gkw+vtk+e+ HnH l RWV96481.1 60 FYHTYAAQMGFKARISSFIRSKRDKTIISRQLVCSREGFRSTKDTNgEGRTKRPRMITRVGCRAMIMVKKQSSGKWVVTKCEKIHNHVL 148 9***************************************99997788999********************************87 PP
2	FAR1	99	5.2e-31	217	307	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYA+++GF+ r+s+ ++skr+++i++r +vCskeg+r++++++ +e+ +r+ra+tr+gCka+++vkk+++gkw v++l+++HnHel+p RWV96481.1 217 FYKEYARRAGFRARISSYYRSKRDNSIISRLLVCSKEGFRAKKDENaEERLQRPRAVTRVGCKAMIMVKKRDSGKWTVSRLVKHHNHELTP 307 9**************************************9999956667889********************************986 PP
3	FAR1	85.5	8.4e-27	356	444	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +Y+++ GF++r+s+ ++skr+++i++r fvCskeg+ +++ ++k +r+r+ tr+gCka+l+vkk+++gkw+v+k+e++HnH+l RWV96481.1 356 FYIAYSRHNGFNMRVSTYYRSKRDKSIISRLFVCSKEGFYVKKDMCgESKIKRPREATRVGCKAMLMVKKNYSGKWVVAKFEKDHNHPL 444 9************************************98887765788999********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MGIYYVWFLI NASVLAVDVE PRIADVDEMI ESSVGRELFE PILEPYEGME FESEEAARAF 60 YHTYAAQMGF KARISSFIRS KRDKTIISRQ LVCSREGFRS TKDTNGEGRT KRPRMITRVG 120 CRAMIMVKKQ SSGKWVVTKC EKIHNHVLGT QGKVVMLDYD PYLHEDEEVI ENPVGNETSM 180 NSGAIGNEMV VLPPEGEPGH EPHEGMEFES EQEAQVFYKE YARRAGFRAR ISSYYRSKRD 240 NSIISRLLVC SKEGFRAKKD ENAEERLQRP RAVTRVGCKA MIMVKKRDSG KWTVSRLVKH 300 HNHELTPRSA SDDECSAEED DELVEMEQAF VLHEGDAITE PYEGMEFESE EDAKIFYIAY 360 SRHNGFNMRV STYYRSKRDK SIISRLFVCS KEGFYVKKDM CGESKIKRPR EATRVGCKAM 420 LMVKKNYSGK WVVAKFEKDH NHPLGCLSKI RKFRKQKLLS GSPEKNQLEL NHNGKESPTT 480 RYNNLCREAM KYAEVGAASP DVYSVAMHAL REAVKKVTAI KRKAGGVADL GPVVGKCSIG 540 NRNKQDSQIE TSMLLNQQSR ARSHPSESRS KSSYDRPARK MRICNSGKRS RDHIGSCPSK 600 QVQVKFFEKV LHIAFF

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MGIYYVWFLI NASVLAVDVE PRIADVDEMI ESSVGRELFE PILEPYEGME FESEEAARAF  60
YHTYAAQMGF KARISSFIRS KRDKTIISRQ LVCSREGFRS TKDTNGEGRT KRPRMITRVG  120
CRAMIMVKKQ SSGKWVVTKC EKIHNHVLGT QGKVVMLDYD PYLHEDEEVI ENPVGNETSM  180
NSGAIGNEMV VLPPEGEPGH EPHEGMEFES EQEAQVFYKE YARRAGFRAR ISSYYRSKRD  240
NSIISRLLVC SKEGFRAKKD ENAEERLQRP RAVTRVGCKA MIMVKKRDSG KWTVSRLVKH  300
HNHELTPRSA SDDECSAEED DELVEMEQAF VLHEGDAITE PYEGMEFESE EDAKIFYIAY  360
SRHNGFNMRV STYYRSKRDK SIISRLFVCS KEGFYVKKDM CGESKIKRPR EATRVGCKAM  420
LMVKKNYSGK WVVAKFEKDH NHPLGCLSKI RKFRKQKLLS GSPEKNQLEL NHNGKESPTT  480
RYNNLCREAM KYAEVGAASP DVYSVAMHAL REAVKKVTAI KRKAGGVADL GPVVGKCSIG  540
NRNKQDSQIE TSMLLNQQSR ARSHPSESRS KSSYDRPARK MRICNSGKRS RDHIGSCPSK  600
QVQVKFFEKV LHIAFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	8e-43	FAR1 family protein