PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV96389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SRS | ||||||||
Protein Properties | Length: 236aa MW: 24280 Da PI: 8.0202 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 215.4 | 1.3e-66 | 1 | 161 | 6 | 153 |
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....................aeaaskrkrelkskkq 83 +sCqdCGnqakkdC+h+RCRtCCksrgf+C thvkstWvpaakrrerqqq+a+a+ + ++++ + skr+re RWV96389.1 1 MSCQDCGNQAKKDCSHMRCRTCCKSRGFQCPTHVKSTWVPAAKRRERQQQQATAAPSLQQQSqqlriggstsgggggdvggsgGGEPSKRPRE-----M 94 68*********************************************9998887665554444578887777777665543333333333333.....2 PP DUF702 84 salsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++ st +++a+ + s+P+evss+avfrcvrvs +dd e+e+aYqtavsigGhvfkGiLyd+G++ RWV96389.1 95 TTHLSTVITTAS---SGGELSFPAEVSSPAVFRCVRVSPLDDTEDEFAYQTAVSIGGHVFKGILYDHGPD 161 333333333333...345667***********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MSCQDCGNQA KKDCSHMRCR TCCKSRGFQC PTHVKSTWVP AAKRRERQQQ QATAAPSLQQ 60 QSQQLRIGGS TSGGGGGDVG GSGGGEPSKR PREMTTHLST VITTASSGGE LSFPAEVSSP 120 AVFRCVRVSP LDDTEDEFAY QTAVSIGGHV FKGILYDHGP DVPTPSTPLA LHGESSSSAA 180 AASISTAAAL ATGLAAPTSS ATAAASAGSM DPSALYPTPL SAFMAGTQFF PHHPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 6e-51 | SRS family protein |