PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV96321.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 773aa MW: 86987.3 Da PI: 5.9001

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV96321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72	7.6e-23	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l RWV96321.1 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 222 99***************************8544444..48**********************************************..8888889 PP EEEEE- CS B3 93 vvkvfr 98 +++++ RWV96321.1 223 LLGIRH 228 999986 PP
2	Auxin_resp	117.2	1.3e-38	254	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k+ ka+ ++vsvGmRf+m fete+ss rr++Gt++g+ dldpvrWpnS+Wr ++ RWV96321.1 254 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRTVQ 337 79*****************************986599****************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MKLSTVGISQ QAPEEEEKRC LDSKLWHACA GPLVCLPTAG TRVVYFPQGH SEQVAASTNK 60 EVEGHIPNYP SLQPQLLCQL HNVTLHADVE TDEVYAQMTL QPLSPEEQKD AYFPMEMGIA 120 SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA RDLHDVEWKF 180 RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLLLGIRHAN RPQTSTPSSV 240 LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LSKYIKAVFH TRVSVGMRFR 300 MLFETEESSV RRYMGTITGI GDLDPVRWPN SHWRTVQVGW DESTAGERQR RVSLWEIEPL 360 TTFPMYPSLF PIGLRRSWHP GASFPHDNRE DEFNTFMWPR GVTAEQGMYS LNLPSLGTGP 420 WIQQRHETLL LGSEFDQYQA MCPLAFQDIR CGDILKQQFL QNQQPIQFLQ QSCTSSSLFK 480 HQDNQQQIVN PQPQCLTENH RHPVPYQQLQ PPHTEQQKQQ PQEANVYTQA FTMHNNHVQR 540 QSALPSPLFE NSTIPDSHLN FSSVPTPISD QDILGSAYRE GNDGGSNYSR LNQSMISHPS 600 QQSWELNFTK SQMISFDGAA LLSTFPAKNS TAGNDNFTDS QTCTLFGFSK DSSSLLNSAL 660 SNSGTVNDVS TMPYTSSCFQ NSLYGYLDDS PSLLQGAGDT DLQSQTFVKV YKSGSVGRSL 720 DISRFSNYEE LREELGQMFG IEGLLEDPLR SGWQLVFVDR ENDVLLLGDD PWE

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MKLSTVGISQ QAPEEEEKRC LDSKLWHACA GPLVCLPTAG TRVVYFPQGH SEQVAASTNK  60
EVEGHIPNYP SLQPQLLCQL HNVTLHADVE TDEVYAQMTL QPLSPEEQKD AYFPMEMGIA  120
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA RDLHDVEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLLLGIRHAN RPQTSTPSSV  240
LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LSKYIKAVFH TRVSVGMRFR  300
MLFETEESSV RRYMGTITGI GDLDPVRWPN SHWRTVQVGW DESTAGERQR RVSLWEIEPL  360
TTFPMYPSLF PIGLRRSWHP GASFPHDNRE DEFNTFMWPR GVTAEQGMYS LNLPSLGTGP  420
WIQQRHETLL LGSEFDQYQA MCPLAFQDIR CGDILKQQFL QNQQPIQFLQ QSCTSSSLFK  480
HQDNQQQIVN PQPQCLTENH RHPVPYQQLQ PPHTEQQKQQ PQEANVYTQA FTMHNNHVQR  540
QSALPSPLFE NSTIPDSHLN FSSVPTPISD QDILGSAYRE GNDGGSNYSR LNQSMISHPS  600
QQSWELNFTK SQMISFDGAA LLSTFPAKNS TAGNDNFTDS QTCTLFGFSK DSSSLLNSAL  660
SNSGTVNDVS TMPYTSSCFQ NSLYGYLDDS PSLLQGAGDT DLQSQTFVKV YKSGSVGRSL  720
DISRFSNYEE LREELGQMFG IEGLLEDPLR SGWQLVFVDR ENDVLLLGDD PWE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.2	0.0	ARF family protein