PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94809.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 226aa MW: 24927 Da PI: 6.3894 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 1e-17 | 14 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqk 46 rg+W++eEde+l+ ++q+G+g W+ Ia+ ++ gRt++++k++w++ RWV94809.1 14 RGPWSPEEDEKLKSHIEQHGTGgnwitlpqkigMWSIIAAQLP-GRTDNDIKNHWNT 69 89*****************************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDEKLKSHIE QHGTGGNWIT LPQKIGMWSI IAAQLPGRTD 60 NDIKNHWNTR LKKKLFGKQC DDRRRHTRRI TRPEQDNIDH GTGDLGIIST GVSHSDCYWA 120 QQPALSYPPL RPVSEGSATP VTPPLQSVPF YEGSLSPTGF STELDELFQF NSAKLEGLDC 180 FNETNGGSAS AGMNWNQVNP LLCVAHGMQQ LPPLEEPVQL GASVDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 85 | KKKLFGKQCDDRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 1e-38 | MYB family protein |