PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94605.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 471aa MW: 51337.9 Da PI: 5.1207

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.3	1.6e-35	146	237	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+e+g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll++i+ RWV94605.1 146 FLTKTYQLVDDPSVDDMISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKRLLCDIH 233 9***************************************************************99.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k RWV94605.1 234 RRKI 237 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MICRHASVAP FPLFLVEAPL TPPATCLDHK KASPRKLIMR RPSPPAMRPI CPPPPLFFAT 60 PFFRLPHLIL SATEPSGSAY KVSALPDLPT LPFFHPKLGL PSRAIENLSG GDPAAMAPPP 120 LPSAAAAEKA DEPVPPDGQR SLPTPFLTKT YQLVDDPSVD DMISWNEDGS TFVVWRPAEF 180 ARDLLPKYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFANDC FRRGEKRLLC DIHRRKITQA 240 SPAAAAPVAV FVPVDRAGSP ANSGEEQVLS SNSSPGPPTS AAAGSSSSVE LTEENERLRK 300 ENTRLSRELA QMKSLCGHIS VLISKYADEG GGGRAAEAPP PPSTVLELMP ARRAEEEDPE 360 EEDEEEELQE AEAEAETGME VEGGVKAEEV TNARLFGVSI GGKRAREDDK AESPLPEVKS 420 EPEPSDPASD TKKDISPERH QRSWVVYCPR PVRRVCHGPE AGVGDRDGAL T

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MICRHASVAP FPLFLVEAPL TPPATCLDHK KASPRKLIMR RPSPPAMRPI CPPPPLFFAT  60
PFFRLPHLIL SATEPSGSAY KVSALPDLPT LPFFHPKLGL PSRAIENLSG GDPAAMAPPP  120
LPSAAAAEKA DEPVPPDGQR SLPTPFLTKT YQLVDDPSVD DMISWNEDGS TFVVWRPAEF  180
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFANDC FRRGEKRLLC DIHRRKITQA  240
SPAAAAPVAV FVPVDRAGSP ANSGEEQVLS SNSSPGPPTS AAAGSSSSVE LTEENERLRK  300
ENTRLSRELA QMKSLCGHIS VLISKYADEG GGGRAAEAPP PPSTVLELMP ARRAEEEDPE  360
EEDEEEELQE AEAEAETGME VEGGVKAEEV TNARLFGVSI GGKRAREDDK AESPLPEVKS  420
EPEPSDPASD TKKDISPERH QRSWVVYCPR PVRRVCHGPE AGVGDRDGAL T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	6e-71	HSF family protein