PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV94307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 135aa MW: 15087.5 Da PI: 5.4954 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.3 | 6.2e-12 | 9 | 53 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT e d+ + a + ++ + +W++Ia+ ++ g+t +++k+++ RWV94307.1 9 SWTREQDKAFEYALATHPEDcnnRWEKIAADVP-GKTIEDIKHHYE 53 7********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MEEASCSPSW TREQDKAFEY ALATHPEDCN NRWEKIAADV PGKTIEDIKH HYELLVEDVN 60 GIESGRVPLP CYPSSSEGGD LANEGGISKK GGHSHCDSGH GGKASRSDQE RRKGIAWTED 120 EHRLNHYTHF LSWVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 3e-38 | MYB family protein |