PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV93117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 271aa MW: 30598.8 Da PI: 10.7674 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 5.9e-18 | 149 | 199 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r+r++lg++ ++e Aa a+++a+ kl+ge RWV93117.1 149 LYRGVRQRH-WGKWVAEIRLPQN---RTRIWLGTYYSPESAAYAYDRAAYKLRGE 199 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MVDRTLETPS PAAFPQEFSS SPLDILLCGT KIKHFPESED KAFFGGEDKA RTWNCRLGDK 60 GMVRIVDRTL ETPSPSAFPR GFSSSPLDIL RCGTTPLRAA RSPAALSIGS SVYHRQAELL 120 RRFSTHFHHY GASKDAVASA AETREKRKLY RGVRQRHWGK WVAEIRLPQN RTRIWLGTYY 180 SPESAAYAYD RAAYKLRGEY ARLNFPGLRD AGDCPERLRP LQLAVDSKIQ AIYQRLGRPR 240 GAMREAAGGK KEKSAEEKNR RKGKNRVSSR T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22190.1 | 3e-38 | ERF family protein |