PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90688.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 500aa MW: 54665.4 Da PI: 8.5786

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.5	4.3e-08	259	289	60	90
FAR1 60 tgCkaklkvkkekdgkwevtkleleHnHela 90 C+a+++v+++++g+w v+k+eleH+H+l RWV90688.1 259 DRCRATMEVTRRENGRWGVSKIELEHTHPLD 289 57***************************97 PP
2	FAR1	25.8	3.4e-08	319	381	1	60
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrt 60 ++Yn+Y++++GF+ ++ + k+s+ ++ ++++f Csk +++ ++ + t+k++r + +rt RWV90688.1 319 QYYNAYSEKMGFQSKMGSGKRSRGTRLLIMQRFSCSKGHFPTYNNAAensTKKRKRGTYRKRT 381 69**************************************99998885443333333334444 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
HVSLRLQDPT APSPSLVAEF RSPAPPSSAR DPLLRPRPPP PPLLLPLLRT SNPPPPLRDP 60 SFRVSRTEEE EEQQLGLPKL RALGSLGFPV QSLLRSRSRD SMVLISEITD EVPKAEGDGA 120 PDPKVEQSDD AEPTLAAADT TAQDTDPIES EQTQPRPPTP TQEPLPLPEQ QEQPPLPQDT 180 PPEPSGINPP PPPPPSSSSA PPDDSQLAAP APPSLSAPVK VPYNEYALRV AYIMRSYLHM 240 RPGSATSHAP PASAADGEDR CRATMEVTRR ENGRWGVSKI ELEHTHPLDP PPDPAGTLAA 300 GRLVPVVGME FDSISAAKQY YNAYSEKMGF QSKMGSGKRS RGTRLLIMQR FSCSKGHFPT 360 YNNAAENSTK KRKRGTYRKR TEKEAEEAKK DGNAVEVIQL ESSTDKEGMA VDEQRPEVQS 420 GRPETSDAGK TLSSSVNEKG KGKDVGKVPL VSNPGQSRLL RELGIRVSRY THEERRNIIL 480 KYMQKRSGRQ AVDRSIKVTL

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

HVSLRLQDPT APSPSLVAEF RSPAPPSSAR DPLLRPRPPP PPLLLPLLRT SNPPPPLRDP  60
SFRVSRTEEE EEQQLGLPKL RALGSLGFPV QSLLRSRSRD SMVLISEITD EVPKAEGDGA  120
PDPKVEQSDD AEPTLAAADT TAQDTDPIES EQTQPRPPTP TQEPLPLPEQ QEQPPLPQDT  180
PPEPSGINPP PPPPPSSSSA PPDDSQLAAP APPSLSAPVK VPYNEYALRV AYIMRSYLHM  240
RPGSATSHAP PASAADGEDR CRATMEVTRR ENGRWGVSKI ELEHTHPLDP PPDPAGTLAA  300
GRLVPVVGME FDSISAAKQY YNAYSEKMGF QSKMGSGKRS RGTRLLIMQR FSCSKGHFPT  360
YNNAAENSTK KRKRGTYRKR TEKEAEEAKK DGNAVEVIQL ESSTDKEGMA VDEQRPEVQS  420
GRPETSDAGK TLSSSVNEKG KGKDVGKVPL VSNPGQSRLL RELGIRVSRY THEERRNIIL  480
KYMQKRSGRQ AVDRSIKVTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	4e-08	FAR1 family protein