PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90372.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 473aa MW: 53708.7 Da PI: 7.3339

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.3	1.4e-25	153	248	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a+++++e+ +++ +kk++W+++sk+m+erg+ +sp+qC++k+++lnkryk+++++ +++ +++++++ +++d++ RWV90372.1 153 KWTDAMVRLLITAVSYVGEDAPSECggrrkyailQKKGKWKAISKVMAERGCYVSPQQCEDKFNDLNKRYKRLTDILGRGtSCKVVENPALLDHMS 248 7******************9988888899999******************************************6699*****99996 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MALLLVDVTH GSRFISWPCL GPTHIDRCSA RVNAVRGGSF SPNAGRRDME GNINAGSLMP 60 GASYGAMGLQ GNVHMHQVSI IHPPPVCDAF GVPGRHLQES DHRAGVSIMD YHKGERGRTS 120 MSDDDEPSLT EDGADAQNEA GKGKKGCPWQ RMKWTDAMVR LLITAVSYVG EDAPSECGGR 180 RKYAILQKKG KWKAISKVMA ERGCYVSPQQ CEDKFNDLNK RYKRLTDILG RGTSCKVVEN 240 PALLDHMSNL SEKMKDDVRK ILSSKHLFYE EMCSYHNCNR LNLPADPALQ RSLQLALRSR 300 DEHDRRRGSH EDVDEDDHSA DGDDEEGDAE EHNVHGHMVA SCFPKRMKHG VNHEEVVFGD 360 TCALQNSTRS LQPQGLTIDM NQVFSEGSKS TLIQQHWVNS YPLHLEEKKL HIQAQMLELE 420 KQRYKWQRFS KKKDRELNMM RMENERMKLE NERLSLELRQ KEMELDLTSK KTQ

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MALLLVDVTH GSRFISWPCL GPTHIDRCSA RVNAVRGGSF SPNAGRRDME GNINAGSLMP  60
GASYGAMGLQ GNVHMHQVSI IHPPPVCDAF GVPGRHLQES DHRAGVSIMD YHKGERGRTS  120
MSDDDEPSLT EDGADAQNEA GKGKKGCPWQ RMKWTDAMVR LLITAVSYVG EDAPSECGGR  180
RKYAILQKKG KWKAISKVMA ERGCYVSPQQ CEDKFNDLNK RYKRLTDILG RGTSCKVVEN  240
PALLDHMSNL SEKMKDDVRK ILSSKHLFYE EMCSYHNCNR LNLPADPALQ RSLQLALRSR  300
DEHDRRRGSH EDVDEDDHSA DGDDEEGDAE EHNVHGHMVA SCFPKRMKHG VNHEEVVFGD  360
TCALQNSTRS LQPQGLTIDM NQVFSEGSKS TLIQQHWVNS YPLHLEEKKL HIQAQMLELE  420
KQRYKWQRFS KKKDRELNMM RMENERMKLE NERLSLELRQ KEMELDLTSK KTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-110	Trihelix family protein