PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV88762.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 279aa MW: 31474.3 Da PI: 6.1658 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25 | 4.3e-08 | 60 | 86 | 22 | 48 |
T.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 g.tWktIartmgkgRtlkqcksrwqkyl 48 + +W++Ia +++ gRt++++k+ w+++l RWV88762.1 60 PfRWSAIAMHLP-GRTDNEIKNLWHTHL 86 278*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MADLTQVMPI RQRSYGRSDT SKVDTSTCGR ITHRRMVGMV EAYDDRVSHK GDQVARNSDP 60 FRWSAIAMHL PGRTDNEIKN LWHTHLKKKL IQMGFDPMTH RPRTDFFTAL PQLLALLQLH 120 QLMNGHPQDD NHAARLQVLE AVQAAKLQYF QCLIQSVDAT PNNSYNSSDL ETISLLSSQM 180 ISSFPSYNPP QHIDSSNQLP SFFEPPESND NKQCSNFTGF NQGEDNKPRT PFASPLPPPT 240 DVSVANQGDG CSITSCDRNG TPFCWPEIML DDQFMSEFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10280.1 | 6e-28 | MYB family protein |