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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV88666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 16512.5 Da PI: 5.827 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.8e-20 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p+ +r++lg+fgtae+Aa+a+++a++ + RWV88666.1 6 RYRGVRQRH-WGSWVSEIRHPV----MkTRIWLGTFGTAEDAARAYDEAARLM 53 69******9.**********63....35*********************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MPRLQRYRGV RQRHWGSWVS EIRHPVMKTR IWLGTFGTAE DAARAYDEAA RLMCGSKART 60 NFPVDPNYSI SAPALSPGLM AKLEKCCSAS RGEGKRGEVV APVGREEEAE VTRVDDEYIE 120 EMIEELIYNG SLEISSSSSS SSSSSSSYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 5e-32 | ERF family protein |