PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88641.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SRS

Protein Properties

Length: 342aa MW: 35330.2 Da PI: 8.5757

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	221.2	2.2e-68	99	267	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....................aeaaskrkrelks 80 g++sCqdCGnqakkdCah+RCRtCCksrgf+C th+kstWvpaakrrerqqqlaaa++ +++s+ + skr+re + RWV88641.1 99 GGGMSCQDCGNQAKKDCAHMRCRTCCKSRGFQCPTHIKSTWVPAAKRRERQQQLAAAAALQQQSQrlriggstsgaptggsggggsGGEPSKRPREIAT 197 5789***********************************************999888777766799***999999998766677778887633 PP DUF702 81 kkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + + + t++ss+ +e+ s+P+evss+avfrcvrvs +dd+e+e+aYqta+sigGhvf+GiLydqG+++ RWV88641.1 198 RLPT--AITTTSSG--GGGMEAVSFPAEVSSPAVFRCVRVSPMDDAEDEFAYQTAISIGGHVFRGILYDQGPDS 267 3333..33344444..46799999**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAGFSLGGGS RQGGGEGIPP ESLFLYGSGS SGVGGGGSRN EEITYPRGFE LWQQHQQQIQ 60 RQQQHHLYTT TSGLLSFSDE PLQAGGAIGR TMSMRGSGGG GMSCQDCGNQ AKKDCAHMRC 120 RTCCKSRGFQ CPTHIKSTWV PAAKRRERQQ QLAAAAALQQ QSQRLRIGGS TSGAPTGGSG 180 GGGSGGEPSK RPREIATRLP TAITTTSSGG GGMEAVSFPA EVSSPAVFRC VRVSPMDDAE 240 DEFAYQTAIS IGGHVFRGIL YDQGPDSQYP STPRALHGES SSSTAAAAIT TAAAIATSLP 300 AAPTSATTAA ASTGLLDPSA LYTTPLSAFM AGTQFFPHHP RP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAGFSLGGGS RQGGGEGIPP ESLFLYGSGS SGVGGGGSRN EEITYPRGFE LWQQHQQQIQ  60
RQQQHHLYTT TSGLLSFSDE PLQAGGAIGR TMSMRGSGGG GMSCQDCGNQ AKKDCAHMRC  120
RTCCKSRGFQ CPTHIKSTWV PAAKRRERQQ QLAAAAALQQ QSQRLRIGGS TSGAPTGGSG  180
GGGSGGEPSK RPREIATRLP TAITTTSSGG GGMEAVSFPA EVSSPAVFRC VRVSPMDDAE  240
DEFAYQTAIS IGGHVFRGIL YDQGPDSQYP STPRALHGES SSSTAAAAIT TAAAIATSLP  300
AAPTSATTAA ASTGLLDPSA LYTTPLSAFM AGTQFFPHHP RP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	9e-47	SRS family protein