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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV88041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 20910.6 Da PI: 10.2708 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.1 | 3.3e-21 | 34 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g RWV88041.1 34 THFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 84 589*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MALETMRLRK GGFAATAAEN KGSTVVLGGE VRETHFRGVR KRPWGRFAAE IRDPWKKTRK 60 WLGTFDTAEE AARAYDEAAR NLRGPKAKTN FGCPGDHGIQ SSATQISWAA VPRWRSALDG 120 RDLTIGPPPA LPGGGSGRLG YGLGTVEVAT RGDQGMEKAL GVAVERKVED EEAEAAKQKQ 180 PFSFDLNLPA PFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 4e-25 | ERF family protein |