PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 24618.3 Da PI: 4.5173 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 72 | 120 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g RWV87743.1 72 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALSIKG 120 9****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MADTRNSSEP ESSANSMSSS LSSPSSTTTS SSPSRALQAI DASNQTTATS AGERKSGAGT 60 KRTRDGGTLP AYRGVRMRAW GKWVSEIREP RKKSRIWLGT FPTAEMAARA HDVAALSIKG 120 ATAVLNFPEL AATLPRPATL SPRDVQAAAA KAAAMVPAPS PASPDDPDAS DELGEILELP 180 RLDGCLLDSA NSGGEFVYDD AVDSWAPWVG TEFGLEPDQM WDPTTFGALL WDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-53 | ERF family protein |