PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV87558.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 394aa    MW: 43145.1 Da    PI: 7.5329
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV87558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B381.67.6e-26126227199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+kv+tpsd++  + +++p+++ae++       +   +  +t+t+ d +g+sW++++i r++++r++lt+GW++Fv++++L +gD++vF   ++s++e 
  RWV87558.1 126 FVKVFTPSDANVVNGFYVPRSYAESIfppldlgD-A-TPAQTVTVHDVHGKSWTFRHICRGTPRRHLLTSGWSNFVNSKRLITGDSLVFV--KNSSGEV 220
                 89*****************************743.3.34459************************************************..7799*** PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  RWV87558.1 221 FVGIRRT 227
                 *****97 PP
2Auxin_resp78.81.4e-26266346483
  Auxin_resp   4 aastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                  a ++ +Fev+Y+Pra+++ Fvv+ e v +a++v+++vGmR++m++et+ds++ ++  G v+ v+  d   W++S+W +L+
  RWV87558.1 266 LAGMNLPFEVMYYPRAGSPVFVVPQEAVDAAMSVPWTVGMRVRMSVETDDSARMNCfNGSVTKVTIDDAGMWRRSPWGMLQ 346
                 5667899************************************************99********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
METLAATGEE LRLVDPLVWK ASAGVSSRIP AVGSSVYYFP QGHADQASSL LDFSAVPSLR  60
AYVLCRISSV RLHANPDTDE VFARISLDPR VPPATAPVQP QTVPSSSSSL CLPGAQDNGH  120
RNLIYFVKVF TPSDANVVNG FYVPRSYAES IFPPLDLGDA TPAQTVTVHD VHGKSWTFRH  180
ICRGTPRRHL LTSGWSNFVN SKRLITGDSL VFVKNSSGEV FVGIRRTSRS CAPATLNVDM  240
EEKHGGFSRS VRGRVPPASV VEAVLLAGMN LPFEVMYYPR AGSPVFVVPQ EAVDAAMSVP  300
WTVGMRVRMS VETDDSARMN CFNGSVTKVT IDDAGMWRRS PWGMLQITWD DAEVSQEVRD  360
VSPWQVECVD AGPQGKIPRS IRNMVLKPTD RIQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.15e-98ARF family protein