PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV87312.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family Trihelix
Protein Properties Length: 280aa    MW: 31987.8 Da    PI: 5.1479
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV87312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.39.5e-1920102286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W++ e+ +Li+a+ e++ +l+rg+lk+++Weev++++ ++ g+   +++ +qC++k+e+l+kry++++ + ++      s +p++ +++
  RWV87312.1  20 WSHIETTHLIDAYAERWYTLKRGQLKAQQWEEVAAAVaARCGIdkpSKTGTQCRHKIEKLRKRYRAERLRPGS------SVWPFYGRMD 102
                 ************************************96444553336799***************99988886......46****9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MAAAGPPAAP PRKPVPGQPW SHIETTHLID AYAERWYTLK RGQLKAQQWE EVAAAVAARC  60
GIDKPSKTGT QCRHKIEKLR KRYRAERLRP GSSVWPFYGR MDRMERGPLP ISIRPPVPPR  120
PASANSTDED EVEHEEEEEE EEEEEEEEEE DERVGSNIRS INGILREPNW GPSGVPRNHV  180
PATRRALEME EGESREDESE GEDAGGREVM SQVAAVLRGF SDGLSRMEKR RMQLMREVER  240
DWMQMETKRA EMLRESQRCL LDMIADALPS SKKAKKSHDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.13e-18Trihelix family protein