PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86244.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 298aa MW: 32500.7 Da PI: 8.4591

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.8	1.1e-14	102	153	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i+ A++Y+k+L+ RWV86244.1 102 QRMTHIAVERNRRRQMNEYLAVLRSLMPAS---YVQRGDQASIVAGAINYVKELE 153 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MALEAVVFPQ DLFTYAFKEW CATTGSGGGA WEEKSMVLEC EMAGGGGGTW DPTCSSLARN 60 LQDWNVNSST PTVAAGAPAG AGGRRKRRRT KSIKNKEEVE SQRMTHIAVE RNRRRQMNEY 120 LAVLRSLMPA SYVQRGDQAS IVAGAINYVK ELEQLLQSLE VEKRVKQQAD AAGVASAFAD 180 FFSFPQYSSY SPGGGTTAGN GSGIIDHDSI IRNTEEIEDD ETAAANIEVT MVDSHANLKV 240 LTRRRPKQLL KLVAGLQSSR LLPLHLNVTS VDQMAMYSFS LKVRRTPPPS SSPHHLPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	89	RKRRR
2	85	90	RKRRRT
3	103	114	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-29	bHLH family protein