PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV86236.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 467aa    MW: 51743.8 Da    PI: 7.7104
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV86236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS353.14.4e-108383962365
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cAe v+ gdl +a+++++ l   asp+gd++ Rl+  f +AL+ r+ r        ++ps++s   s +  +++ lf++++P+l+fshltaNq
  RWV86236.1  38 RQLLISCAELVHCGDLPAAERAISILAAAASPYGDSIDRLIRQFCRALSVRIGR--------VSPSAAS---SGSLQSSYLLFNQMTPFLRFSHLTANQ 125
                 79****************************************************........6677776...6667788999***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.......vakrledle 190
                 aIleav+g++++Hi+Dfd  +GlQWp+Llqa+a+R+  ++pp +Ri g g+    s e+l++tg+rL++fA++lg++f+f++l        +++  +++
  RWV86236.1 126 AILEAVDGHRHIHILDFDTYYGLQWPPLLQAIADRSdpGDPPFIRISGTGN----SLEALQRTGDRLRNFAHSLGLEFQFHPLllppsvhSTNTSYNFT 220
                 ***********************************98888***********....9***************************999996444477789* PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 ++ L+++p E+l+Vn+vl lh+l +e+++ +   + + +L++++ ++P vv+v+e+e+ h+s sF++rf+eal+yy+a+f++le++lp++seer+ vE+
  RWV86236.1 221 PSCLQFHPSETLVVNCVLFLHKLQREDGNDDGsrKLQGFLRTIRAMNPSVVTVAERETVHSSRSFMQRFVEALDYYMAVFEALETTLPPTSEERMAVEQ 319
                 **************************999987667789************************************************************* PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdr 365
                 ++lgrei+ +v  eg+ rrerhe   +W + +++aGF++++ s++a++qa+lllr ++ s+gy+++  ++s++   W+++
  RWV86236.1 320 VWLGREIEGIVGGEGDGRRERHE---RWDSLMRDAGFSSLAPSTFAVSQARLLLRLHYpSEGYQLQLVRDSFLlERWEQQ 396
                 *********************99...9***************************************77777662578876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MLSSLKTDGE GAQDTRLHPD PHHPNPQPGL ISSTVNARQL LISCAELVHC GDLPAAERAI  60
SILAAAASPY GDSIDRLIRQ FCRALSVRIG RVSPSAASSG SLQSSYLLFN QMTPFLRFSH  120
LTANQAILEA VDGHRHIHIL DFDTYYGLQW PPLLQAIADR SDPGDPPFIR ISGTGNSLEA  180
LQRTGDRLRN FAHSLGLEFQ FHPLLLPPSV HSTNTSYNFT PSCLQFHPSE TLVVNCVLFL  240
HKLQREDGND DGSRKLQGFL RTIRAMNPSV VTVAERETVH SSRSFMQRFV EALDYYMAVF  300
EALETTLPPT SEERMAVEQV WLGREIEGIV GGEGDGRRER HERWDSLMRD AGFSSLAPST  360
FAVSQARLLL RLHYPSEGYQ LQLVRDSFLL ERWEQQRKRR LPVGVLVCLT QKDPPAILKP  420
LVPAAAVGSV KALFAPLLRS SNRKAWEFVV HQAAAAQGRT SSASSSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.12e-78GRAS family protein