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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV86041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 153aa MW: 17085.2 Da PI: 6.9468 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 10 | 60 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr+++ +g+Wv+eIr+p + r +lg++ t+e Aa a++ a l+g RWV86041.1 10 KKYKGVRRRR-WGKWVSEIRVPG----NgERLWLGSYATPEAAAVAHDTAVFFLRG 60 59*****777.**********83....34**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MSHGQVGGEK KYKGVRRRRW GKWVSEIRVP GNGERLWLGS YATPEAAAVA HDTAVFFLRG 60 PSHAGRLNFP DRAVALTWAC LSPPSVQRAA SESGMAVDAQ MQEAAWREER RRHPPSSDVS 120 WEMISRREPG DSDVCMGSEL YGDISVDDME IWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 8e-33 | ERF family protein |