PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV85959.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 27695.2 Da PI: 9.8855 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.7 | 7e-19 | 95 | 145 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr++ +g+WvAeIr p + r r++lg+++++e Aa a+++a+ kl+ge RWV85959.1 95 HYRGVRQRQ-WGKWVAEIRLPQN---RMRIWLGTYDSPESAAYAYDRAAYKLRGE 145 8*****999.**********954...59*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDGTLETIQL TSFSGDISAA LSEILLSGTN ALDSIFSHLP PPLPAARYPV AASLGSAVYL 60 RQTELLRRLS TRRYGGATHS PYHNSATAEN GNEKHYRGVR QRQWGKWVAE IRLPQNRMRI 120 WLGTYDSPES AAYAYDRAAY KLRGEYARLN FPALRDAGDC PERLRSLRSA VDSKIQAICQ 180 RLSRRRAAAK RSAEGAGDKA RSAKAAAKAV KGAEAGASQT SSLTSSSACE MDGVCSLARM 240 PSYDPELIWE VLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 3e-38 | ERF family protein |